Publications

Baden T, Briseño J, Coffing G, Cohen-Bodénès S, Courtney A, Dickerson D et al. Cephalopod-omics: Emerging Fields and Technologies in Cephalopod Biology. Integrative and Comparative Biology. 2023 Dez. 1;63(6):1226-1239. Epub 2023 Juni 27. doi: 10.1093/icb/icad087

Cole AG, Jahnel SM, Kaul S, Steger J, Hagauer J, Denner A et al. Muscle cell-type diversification is driven by bHLH transcription factor expansion and extensive effector gene duplications. Nature Communications. 2023 Dez.;14(1):1747. doi: 10.1038/s41467-023-37220-6

Vetrova AA, Kupaeva DM, Kizenko A, Lebedeva T, Walentek P, Tsikolia N et al. The evolutionary history of Brachyury genes in Hydrozoa involves duplications, divergence, and neofunctionalization. Scientific Reports (Nature Publisher Group). 2023 Dez.;13(1):9382. doi: 10.1038/s41598-023-35979-8

Zimmermann B, Montenegro JD, Robb SMC, Fropf WJ, Weilguny L, He S et al. Topological structures and syntenic conservation in sea anemone genomes. Nature Communications. 2023 Dez.;14(1):8270. 8270. doi: 10.1038/s41467-023-44080-7

Park AH, Patel H, Mirabelli J, Eder SJ , Steyrl D , Lueger-Schuster B et al. Machine learning models predict PTSD severity and functional impairment: A personalized medicine approach for uncovering complex associations among heterogeneous symptom profiles. Psychological Trauma. 2023 Nov. 27;17(2):372-386. doi: 10.1037/tra0001602

Rogers TF , Simakov O. Emerging questions on the mechanisms and dynamics of 3D genome evolution in spiralians. Briefings in functional genomics. 2023 Nov. 1;22(6):533-542. Epub 2023. doi: 10.1093/bfgp/elad043

Grausgruber A , Revilla Domingo R. Tracing the history of cell types. eLife. 2023 Aug. 2;12:e90447. doi: 10.7554/elife.90447

Kon-Nanjo K, Kon T, Horkan HR, Febrimarsa, Steele RE, Cartwright P et al. Chromosome-level genome assembly of Hydractinia symbiolongicarpus. G3: Genes, Genomes, Genetics. 2023 Aug.;13(8):jkad107. Epub 2023. doi: 10.1093/g3journal/jkad107

Rouressol L, Briseno J, Vijayan N, Chen GY, Ritschard EA, Sanchez G et al. Emergence of novel genomic regulatory regions associated with light-organ development in the bobtail squid. iScience. 2023 Juli 21;26(7):107091. doi: 10.1016/j.isci.2023.107091

Budd GE, Mayer G, Janssen R, Eriksson BJ. Comment on “The lower Cambrian lobopodian Cardiodictyon resolves the origin of euarthropod brains”. Science. 2023 Juni 30;380(6652). doi: 10.1126/science.adg1412

Schultz DT, Haddock SHD, Bredeson JV, Green RE, Simakov O, Rokhsar DS. Ancient gene linkages support ctenophores as sister to other animals. Nature. 2023 Juni;618(7963):110-117. doi: 10.1038/s41586-023-05936-6

Lev I , Zimmer M. Memory: When neurons split the load. eLife. 2023 Mai 4;12:e87861. doi: 10.7554/eLife.87861

Roberts MB, Schultz DT, Gatins R, Escalona M, Bernardi G. Chromosome-level genome of the three-spot damselfish, Dascyllus trimaculatus. G3: Genes, Genomes, Genetics. 2023 Apr.;13(4):jkac339. doi: 10.1093/g3journal/jkac339

Clarence T, Robert NSM, Sarigol F, Fu X, Bates PA, Simakov O. Robust 3D modeling reveals spatiosyntenic properties of animal genomes. iScience. 2023 März 17;26(3):106136. doi: 10.1016/j.isci.2023.106136

Huang Z, Xu L, Cai C, Zhou Y, Liu J, Xu Z et al. Three amphioxus reference genomes reveal gene and chromosome evolution of chordates. Proceedings of the National Academy of Sciences of the United States of America. 2023 März 7;120(10):e2201504120. doi: 10.1073/pnas.2201504120

Huang Z, Xu Z, Bai H, Huang Y, Kang N, Ding X et al. Evolutionary analysis of a complete chicken genome. Proceedings of the National Academy of Sciences of the United States of America. 2023 Feb. 21;120(8):e2216641120. doi: 10.1073/pnas.2216641120

Cazet JF, Siebert S, Morris Little H, Bertemes P, Primack AS, Ladurner P et al. A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state. Genome Research. 2023 Feb. 1;33(2):283-298. Epub 2023 Jan. 13. doi: 10.1101/gr.277040.122

Kasture A, Fischer FP, Kunert L, Burger M, Burgstaller A, El-Kasaby A et al. Drosophila melanogaster as a model for unraveling unique molecular features of epilepsy elicited by human GABA transporter 1 variants. Frontiers in Neuroscience. 2023 Jan. 19;16:1074427. Epub 2023 Jan. 19. doi: 10.3389/fnins.2022.1074427

Bhat S, El-Kasaby A, Kasture A, Boytsov D, Reichelt J, Hummel T et al. A mechanism of uncompetitive inhibition of the serotonin transporter. eLife. 2023 Jan. 17;12:e82641. doi: 10.7554/eLife.82641

Limón J, Roberts MB, Schultz DT, Bernardi G. The complete mitochondrial genome of Dascyllus trimaculatus (Rüppell, 1829). Mitochondrial DNA Part B. 2023 Jan. 2;8(1):105-106. doi: 10.1080/23802359.2022.2161838